| Registro completo |
| Provedor de dados: |
Naturalis
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| País: |
Netherlands
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| Título: |
New primers for promising single-copy genes in fungal phylogenetics and systematics
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| Autores: |
Schmitt, I.
Crespo, A.
Divakar, P.K.
Fankhauser, J.D.
Herman-Sackett, E.
Kalb, K.
Nelsen, M.P.
Nelson, N.A.
Rivas-Plata, E.
Shimp, A.D.
Widhelm, T.
Lumbsch, H.T.
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| Data: |
2009
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| Ano: |
2009
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| Palavras-chave: |
Ascomycota
DNA replication licensing factor
Evolution
Lichenised fungi
Mcm7
MS277
MS456
Phylogeny
Pre-rRNA processing protein
Protein-coding
Tsr1
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| Resumo: |
Developing powerful phylogenetic markers is a key concern in fungal phylogenetics. Here we report degenerate primers that amplify the single-copy genes Mcm7 (MS456) and Tsr1 (MS277) across a wide range of Pezizomycotina (Ascomycota). Phylogenetic analyses of 59 taxa belonging to the Eurotiomycetes, Lecanoromycetes, Leotiomycetes, Lichinomycetes and Sordariomycetes, indicate the utility of these loci for fungal phylogenetics at taxonomic levels ranging from genus to class. We also tested the new primers in silico using sequences of Saccharomycotina, Taphrinomycotina and Basidiomycota to predict their potential of amplifying widely across the Fungi. The analyses suggest that the new primers will need no, or only minor sequence modifications to amplify Saccharomycotina, Taphrinomycotina and Basidiomycota.
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| Tipo: |
Article / Letter to the editor
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| Identificador: |
http://www.repository.naturalis.nl/record/531799
http://www.repository.naturalis.nl/document/569625
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| Formato: |
application/pdf
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| Fonte: |
Persoonia - Molecular Phylogeny and Evolution of Fungi (0031-05850) vol.23 (2009) nr.1 p.35
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| Direitos: |
(c) Naturalis
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